STRAIN PROJECT
ANR 2018

Find below the pdf files of the reference papers given in the proposal.

1- M. T. Alvarez-Martinez, P. Fontes, V. Zomosa-Signoret, J.-D. Arnaud, E. Hingant, L. Pujo-Menjouet, and J.-P. Liautard. Dynamics of polymerization shed light on the mechanisms that lead to multiple amyloid structures of the prion protein. Biochimica et Biophysica Acta, 1814, 2011.
2- V. Calvez, N. Lenuzza, M. Doumic, J-M. Deslys, F. Mouthon, and B. Perthame. Prion dynamics with size dependency-strain phenomena. J. of Biol. Dyn., 4(1):28 – 42, 2010.
3- I. S. Ciuperca, M. Dumont, A. Lakmeche, P. Mazzocco, L. Pujo-Menjouet, H. Rezaei, and L. M. Tine. Alzheimer’s disease and prion: an in vitro mathematical model. submitted, 2017.
4- A. Derdowski, S. S. Sindi, C. L. Klaips, S. DiSalvo, and T. R Serio. A size threshold limits prion transmission and establishes phenotypic diversity. Science, 330(6004):680–683, 2010.
5- H. Engler, J. Prüss, and G. F. Webb. Analysis of a model for the dynamics of prions II. Journal of Mathematical Analysis and Applications, 324(1):98 – 117, 2006.
6- M. L. Greer, L. Pujo-Menjouet, and G. F. Webb. A mathematical analysis of the dynamics of prion proliferation. Journal of Theoretical Biology, 242(3):598 – 606, 2006.
7- M. Helal, A. Lakmeche, P. Mazzocco, A. Perrillat-Mercerot, L. Pujo-Menjouet, H. Rezaei, and L. M. Tine. Sta- bility Analysis of a Steady State of a Model Describing Alzheimer’s Disease and Interactions with Prion Proteins. submitted, 2017.
8- E. Hingant, P. Fontes, M. T. Alvarez-Martinez, J.-D. Arnaud, J.-P. Liautard, and L. Pujo-Menjouet. A Micellar On-Pathway Intermediate Step Explains the Kinetics of Prion Amyloid Formation. PLOS Computational Biology, 10, 2014.
9- A. Igel-Egalon, M. Moudjou, D. Martin, A. Busley, T. Knäpple, L. Herzog, F. Reine, N. Lepejova, C-A. Richard, V. Béringue, and H. Rezaei. Reversible unfolding of infectious prion assemblies reveals the existence of an oligo- meric elementary brick. PLoS Pathogens, 13(9), 2017.
10- K.A. Langenfeld, R. A. Shikiya, A. E. Kincaid, and J. C. Bartza. Incongruity between Prion Conversion and Incubation Period following Coinfection. Journal of Virology, 90(12), 2016.
11- P. Lemarre, L. Pujo-Menjouet, and S. S. Sindi. Generalizing a mathematical model of prion aggregation allows strain coexistence and co-stability by including a novel misfolded species. submitted, 2017.
12- J. Li, S. Browning, S. P. Mahal, A. M. Oelschlegl, and C. Weissman. Darwinian Evolution of Prions in Cell Culture. Science, 327(5967):869–872, 2010.
13- J. Masel, V.A.A. Jansen, and M.A. Nowak. Quantifying the kinetic parameters of prion replication. Biophysical Chemistry, 77:139–152, 1999.
14- J. Prüss, L. Pujo-Menjouet, G.F. Webb, and R. Zacher. Analysis of a model for the dynamics of prions. Discrete and Continuous Dynamical Systems - Series B, 6(1):225 – 235, January 2006.
15- R.A. Shikiya, J.I. Ayers, C.R Schutt, A.E. Kincaid, and J.C. Bartz. Coinfecting Prion Strains Compete for a Limiting Cellular Resource. Journal of Virology, 84(11), 2010.